SubjectsSubjects(version: 978)
Course, academic year 2025/2026
   
Pathobiochemistry 2 - Molecular Oncology - B82432 (General Medicine - English parallel, compulsory elective)
Title: Pathobiochemistry 2 - Molecular Oncology
Guaranteed by: Institute of Biochemistry and Experimental Oncology First Faculty of Medicine Charles University (11-00140)
Faculty: First Faculty of Medicine
Actual: from 2023
Semester: winter
Points: 2
E-Credits: 2
Examination process: winter s.:
Hours per week, examination: winter s.:15/0, Ex [HS]
Extent per academic year: 15 [hours]
Capacity: 45
Min. number of students: unlimited
4EU+: no
Virtual mobility / capacity: no
State of the course: taught
Language: English
Teaching methods: full-time
Explanation: Please choose only one of the three Pathobiochemistry coursessee website of institute
Additional information: https://ubeo.lf1.cuni.cz/
Note: enabled for web enrollment
Guarantor: prof. MUDr. Aleksi Šedo, DrSc.
Attributes: Lékařství
Teoretický předmět
Incompatibility : B82431, B82433
Pre-requisite : B83120
Is incompatible with: B82431, B82711, B82433
Is interchangeable with: B80925
In complex pre-requisite: B80114, B82711
Annotation
Biochemical and molecular mechanisms of origin and development of tumor diseases (physical, chemical and viral carcinogenesis, pathobiochemistry of malignant transformation, tumor microenvironment, regulation of neovascularization, metastatic cascade). Molecular and biological diagnostics in oncology, biomarkers of tumor diseases. Biochemical principles of antitumor therapy, mechanisms of a tumor resistance to antitumor therapy, signal transduction pathobiochemistry as a therapeutic target.
Last update: Stollinová Šromová Lucie, Mgr., Ph.D. (31.05.2019)
Course completion requirements

 

 

The subjects ends with an examination.

A student can take an examination in a subject for three times as a maximum, i.e. the student is entitled to two re-examinations, and no extraordinary terms beyond that are allowed. In case of the second re-examination in a mandatory or elective subject the student is examined by a committee consisting of at least two examiners. If the internal faculty regulations (Article 19, Paragraph 2), permit repeated registration for the subject, the examination by the committee shall be applied only to the second re-examination in case of the repeatedly registered subject. By this a right of the faculty to enable examination by the committee in other cases, if implied by the internal regulations (Article 19, Paragraph 2), is not affected.

If a student fails to answer a partial question at the exam, it is sufficient as a cause for termination of examination and classification of the whole exam as ‘failed’.     

Last update: Stollinová Šromová Lucie, Mgr., Ph.D. (07.12.2020)
Literature

https://ubeo.lf1.cuni.cz/en/recommended-literature-pathobiochemistry

Last update: Stollinová Šromová Lucie, Mgr., Ph.D. (25.09.2023)
Requirements to the exam

Questions - exam Pathobiochemistry 2

 

1.           Physical factors involved in the development of cancer.

2.           Chemical carcinogenesis.

3.           Viral carcinogenesis.

4.           Characteristics of transformed cells.

5.           Disorders of apoptosis activation in cancer cells.

6.           Significance and mechanisms of p53 gene inactivation in the pathogenesis of human tumors.

7.           Disorders of DNA repair mechanisms in carcinogenesis.

8.           Metabolic changes in cancer cells, Warburg effect.

9.           Tumor neovascularization - molecular mechanisms, therapeutic targeting.

10.         Metastatic cascade - molecular mechanisms. Premetastatic niche, micrometastasis, dormancy, colonization.

11.         Tumor microenvironment - relationships between transformed cells and tumor

stroma.

12.         Intratumoral heterogeneity.

13.         Hereditary cancer syndromes and sporadic cancer.

14.         Analysis of hereditary predisposition to cancer - significance, examples, methods.

15.         Analysis of somatic mutations and microsatellite markers in sporadic cancers -.

significance, examples, methods.

16.         Options for detecting minimal residual disease.

17.         Oncogenes and tumor suppressor genes.

18.         Cancer biomarkers - classification according to their use in clinical practice. Sensitivity, specificity, positive and negative predictive values. Methods of determination and detection in biological material.

19.         Cancer biomarkers - biomarkers used for diagnosis and monitoring. Characteristics, distribution, examples. Tumour and organ specificity. Oncofetal antigens.

20.         Cancer biomarkers - prognostic and predictive biomarkers. Characteristics, distribution, examples. Kaplan-Meier survival function estimation.

21.         Cancer biomarkers - biomarkers used for screening and pharmacodynamic biomarkers. Characteristics, distribution, examples, ROC curve.

22.         Hormonal anticancer therapy, biochemical mechanism of action, therapeutic use, adverse effects.

23.         Radiotherapy in cancer treatment, biochemical mechanism of action, therapeutic use, bystander and abscopal effects, adverse effects.

24 Anti-tumour chemotherapy, biochemical mechanism of action of alkylating agents, antimetabolites, microtubular agents and topoisomerase inhibitors, therapeutic use, adverse effects

25. Principles of targeted therapy in oncology, mechanism of action of tyrosine kinase inhibitors, therapeutic use, classification of antibodies, kinome, side effects

26 Mechanism of action of inhibitors of self-renewal signaling cascades Wnt, Notch, Hedgehog, induction of apoptosis, treatment directed against DNA repair mechanisms, therapeutic use, side effects.

27. Therapy directed against CD antigens and epigenetic mechanisms, biochemical mechanism of action, therapeutic use, side effects.

28. Anti-tumour immunotherapy, biochemical mechanism of action of oncolytic viruses, vaccines, LAK and TIL cells, therapeutic use, adverse effects.

29; Anti-tumor immunotherapy, biochemical mechanism of action of CAR-T cells, cytokines and checkpoint inhibitors, T-receptors, therapeutic use, adverse effects.

30.         Pathology of signaling cascades regulating cell growth, biochemical mechanism of action of cyclin/Cdk kinase complex inhibitors, therapeutic applications, adverse effects.

Last update: Stollinová Šromová Lucie, Mgr., Ph.D. (25.09.2023)
Education plan -
Schedule by date
Day Date Description Teacher Files Note Hodnocení
Friday31.10.2025Physical, chemical and viral carcinogenesis, changes in cancer cell metabolism.MUDr. Ivan Melezínek, CSc., mimořádný profesor Univerzity Karlovy 
průměr: 2, hodnoceno: 1x
Monday03.11.2025Mechanisms of tumorigenesis (pathobiochemistry of malignant transformation).MUDr. Ivan Melezínek, CSc., mimořádný profesor Univerzity Karlovy 
Friday07.11.2025DNA-based Diagnostics in OncologyMUDr. Ivan Melezínek, CSc., mimořádný profesor Univerzity Karlovy 
Monday10.11.2025Principles of cancer development (tumor microenvironment, regulation of neovascularization, metastatic cascade).MUDr. Ivan Melezínek, CSc., mimořádný profesor Univerzity Karlovy 
Friday14.11.2025Biochemical principles of anti-cancer treatment I.MUDr. Ivan Melezínek, CSc., mimořádný profesor Univerzity Karlovy 
Friday21.11.2025Biochemical principles of anti-cancer treatment II.MUDr. Ivan Melezínek, CSc., mimořádný profesor Univerzity Karlovy 
Monday24.11.2025 Biochemical principles of anti-cancer treatment II.MUDr. Ivan Melezínek, CSc., mimořádný profesor Univerzity Karlovy 
 
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