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Last update: Mgr. Petr Jeřábek, Ph.D. (05.10.2023)
In case Erasmus students enroll in this course, lectures will be given in English. The subject is lectured on-line using Zoom software https://cesnet.zoom.us/j/92896267436?pwd=bnZMbnNuWk5zTGpYY3I2QlBxZ05Udz09 |
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Last update: HPTEST/NATUR.CUNI.CZ (23.11.2009)
The course is aimed to help students to be well oriented in Internet databases and to show where and how to mine reliable and relevant information. |
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Last update: Mgr. Petr Jeřábek, Ph.D. (14.02.2024)
Software manuals and on-line help are recommended study sources for the course. Handouts for lectures are not provided. |
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Last update: Mgr. Petr Jeřábek, Ph.D. (14.02.2024)
As their exams, students are going to solve practical tasks using computers. Students are allowed to use any source of information (personal notes, books, Google serch, ...). |
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Last update: Mgr. Petr Jeřábek, Ph.D. (14.02.2024)
1. Brief introduction to bioinformatics 2. Protein and DNA databases (Uniprot, GenBank, e.g.) 3. Basic bioinformatics tools (BLAST, pairwise and multiple sequence alignment analysis with Jalview software) 4. Structural databases (Protein Data Bank, e.g.) 5. Vizualization of biomolecules using PyMol software 6. Drawing chemical structures using ChemSketch software 7. Bibliographic databases (PubMed, Web of Science) and other information resources 8. Citation manager Zotero |